Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015826725.1_cds_XP_016502784.1_16385
CDS Infomation

[gene=LOC107820934] [db_xref=GeneID:107820934] [protein=protein AIR1-like isoform X4] [protein_id=XP_016502784.1] [location=complement(join(2040..2537,2682..2789,2903..3019,3102..3263,4935..5093,5191..5307,6545..6796))] [gbkey=CDS]
Sequence

ATGGGTAAGCTGGAGAAGGAGAAATCTGAAGCCATAGACGAAGAAGAATCAAATTCCCAA
CCCGATTTGATGCGCAGCGAGGAGGAAAAAGAAGAAAACGAAGATGCGGACGCTAACGAT
GATCTCAGTTTGAAAATCGTAGAGAAGGCTATGTTACGGGCATGTTCTAGTGTCACCGAC
GAGGAAGAATCCGACATTTTGACAAATAGCAAGAAGAAGAAGGACAAAAATATTGTGACC
AAAGAGGATCCTTACAAAGTAAAGGAAGAGCAAAATGCTGATACTACTATAGCTATGAAT
ATTGATGATAGTGCAGCTGAAAAGACTCCTGTTGAGGTCCCTGACAATGCTGTTCTACGT
AGGCTTCTTCGGGGCCCTAGGTACTTTGATGCTCCAGATAAGAGTTGGGGAACATGCTAT
AATTGTGGTGAAGAGGGTCATGCTGCAGTCAACTGTACTTCAGCTAGACGTAAGAAGCCA
TGTTTTGTTTGTGGGAGTTTCGAACATAATGCTAAACATTGCACAAAGGGCAAAGCTTGT
TTCATCTGCAAAAAAGGAGGTCATCGTGCAAGTGATTGCCCCGAGAGAAGCCATGGAGGA
TCCCAGAGTACTAAAATATGTCTAAAATGTGGGGATTCTGGCCATGATATGTTTTCATGC
AGGAACAACTATTATGCTGATGATCTAAAGGAAATACAATGCTACATCTGTAAGAGTTTT
GGCCATCTTTGCTGTGCAAAATACCCTGATAGTGGTCCGAGAGAATTTTCCTGTTACAGA
TGTGGTCTACTAGGCCATACTGGTTTGGCATGCACGGCATCTCGTGGGGAGACTAGCGGT
ACTGGGTCACTTAATCCCTGTTATAGGTGTGGTGAAGGAGGACATTTTGCACGGGAATGC
ACTAATTCCAGTAGAGTCAATAAGCGAAATCATGAATTATCAACCCCCAAGAAGAAAGTT
CACAAGAAAAGACAAGAGCAAAATGAGTTCAGGTCTGTACCTCGTGATTTTGGTAGGGCA
TGGAAGAAGAAAGGAAAAAATGAAGGCGGATATACGTCAGGCTATCAGATGAAACGAAAG
GGTGGTTGGATCCCGGATGATCCGGAAGACTTTCCTCAACCCAATAATTGGAGATCTCCT
TCAACTCCTAGAAATAAGAGAGCTAAGATTTCTAACTTCAGTAGTGGTGGTCATGCTTCT
GGTTCTCGTTCATCTAGAAAGTCCAACAGGCTTGACTTTGATTCTTCAGCTTCTTATGGG
TCAGGCAAATATCATCACCATAGGTTTTCAGCATCTGGTGATTTTGATAATTCAGCTTCT
TATGGGTCGGGCAAATATCATCATCATAGGTTTTCAGCATCTCGATTTGGCAACAGTAGT
CACGATAGGTGGAGGAGGAATTATGATTGGTAG

Peptide Sequence

PEP ID

XP_016502784.1
PEP Infomation

PREDICTED: protein AIR1-like isoform X4 [Nicotiana tabacum]
Sequence

MGKLEKEKSEAIDEEESNSQPDLMRSEEEKEENEDADANDDLSLKIVEKAMLRACSSVTD
EEESDILTNSKKKKDKNIVTKEDPYKVKEEQNADTTIAMNIDDSAAEKTPVEVPDNAVLR
RLLRGPRYFDAPDKSWGTCYNCGEEGHAAVNCTSARRKKPCFVCGSFEHNAKHCTKGKAC
FICKKGGHRASDCPERSHGGSQSTKICLKCGDSGHDMFSCRNNYYADDLKEIQCYICKSF
GHLCCAKYPDSGPREFSCYRCGLLGHTGLACTASRGETSGTGSLNPCYRCGEGGHFAREC
TNSSRVNKRNHELSTPKKKVHKKRQEQNEFRSVPRDFGRAWKKKGKNEGGYTSGYQMKRK
GGWIPDDPEDFPQPNNWRSPSTPRNKRAKISNFSSGGHASGSRSSRKSNRLDFDSSASYG
SGKYHHHRFSASGDFDNSASYGSGKYHHHRFSASRFGNSSHDRWRRNYDW

Transcript Sequence

Gene sequence data has not been registered.